Insertion junction: CLIP2.001767_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.001767
Chromosome:chromosome 2
Location:3630884
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g099850 PDC2 (1 of 1) PTHR11516:SF25 - PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT ALPHA-3, CHLOROPLASTIC; Pyruvate dehydrogenase, E1 component, alpha subunit 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTATAGAAAAGCCCGGTCAAGTCTTTGGCTAACTGCAAACCAACTGGGCG
Internal bar code:GTCTTGATAACGAGCGTCCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:496
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CGCAGTCTGCTACGCAAATC
Suggested primer 2:CAGTCGGTTTCCTGCTTTGC