Insertion junction: CLIP2.001772_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.001772
Chromosome:chromosome 11
Location:2212448
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467723 KAS1 (1 of 1) PTHR11712//PTHR11712:SF226 - POLYKETIDE SYNTHASE-RELATED // 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE I, CHLOROPLASTIC; 3-ketoacyl-ACP-synthase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACATTCTGAGTCGCGCTCTGGAGAATCGGCCCCGCATTTAGGGTCGTCG
Internal bar code:TGAGACCAAGGTTCGGCGGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1548
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:AAAGTTCCTGATCTGGGCGG
Suggested primer 2:GCAAGACCGACGACCCTAAA