Insertion junction: CLIP2.001775_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.001775
Chromosome:chromosome 16
Location:4369271
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g668650 (1 of 1) PTHR34204//PTHR34204:SF2 - FAMILY NOT NAMED // RNA-BINDING ASCH DOMAIN PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACACACACACACACGCGCGCGCGGGCATCCCTTTGTTGATTATCTTAAA
Internal bar code:CGATGTGTTGCTCAGCGTCCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1063
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:AGTTGGTGTTGTAGGGCGAG
Suggested primer 2:CAAACACCTTGCACTGCCTC