Insertion junction: CLIP2.001776_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.001776
Chromosome:chromosome 16
Location:5893292
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre16.g679250 ELI1,ELIP2,ELI2,ELIP1 Early light-induced LHC-like protein; (1 of 6) PTHR14154//PTHR14154:SF5 - UPF0041 BRAIN PROTEIN 44-RELATED // EARLY LIGHT-INDUCED PROTEIN 1, CHLOROPLASTIC-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTCAACTGCGCGGTCCACGTCGCTGCGCAACGGGACAGCGGGGCTACGA
Internal bar code:TCCTTTCCGTGGTGGCGGTATC

Confirmation - LEAP-Seq

LEAP-Seq distance:862
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGGGAGTGGAGAGGGGAT
Suggested primer 2:ACATCGCCGCATTCCTAGAG