Insertion junction: CLIP2.001780_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.001780
Chromosome:chromosome 9
Location:5337135
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g407650 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTATTTGTCTGCTGGAGGGCCGCCCTACAGCCAGACTGCACAGGCTCTCC
Internal bar code:CTGAGAGAACGAGATGGTCCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1350
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGACCTTGAAGCGGTTCT
Suggested primer 2:GAAGCAGCAGGTGTTGTTGG