Insertion junction: CLIP2.001787_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.001787
Chromosome:chromosome 17
Location:2883686
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g718950 RCA2 (1 of 4) IPR003959//IPR027417 - ATPase, AAA-type, core // P-loop containing nucleoside triphosphate hydrolase; RuBisCO activase-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGATAGGGTGTCGGTGCTGGGGTGGGGTACTGGGTGCACCTTCTGGGG
Internal bar code:GTGATATGAGGAAGTATTTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:641
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GGTTGTGAAACGTCTTGGCC
Suggested primer 2:ACCTCCTCCATCCCATCTCC