Insertion junction: CLIP2.001787_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.001787
Chromosome:chromosome 17
Location:2883689
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g718950 RCA2 (1 of 4) IPR003959//IPR027417 - ATPase, AAA-type, core // P-loop containing nucleoside triphosphate hydrolase; RuBisCO activase-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATCTAACCTCACCCCAGCATACCCACCCCCACCCCAGGTGCCCCACCT
Internal bar code:GGATTTCAAGCCTTCCTAGTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:91
LEAP-Seq percent confirming:5.55556
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTCCTCCATCCCATCTCC
Suggested primer 2:GGTTGTGAAACGTCTTGGCC