Insertion junction: CLIP2.001801_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.001801
Chromosome:chromosome 9
Location:2364242
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g394050 CPLD19 Zinc finger family protein; (1 of 1) PTHR22883:SF91 - PROTEIN S-ACYLTRANSFERASE 12-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGCTGTGTCTCGTCAGCTCACCACCCTCCTTCCCCCCCACCTGCCCCC
Internal bar code:GTGCTCCTGTATCTCGACACTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1345
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCCTCAACAACCCGGTAT
Suggested primer 2:GCCAGATACGACCACACACA