Insertion junction: CLIP2.001802_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.001802
Chromosome:chromosome 10
Location:1104329
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g425350 (1 of 6) IPR001245//IPR011009 - Serine-threonine/tyrosine-protein kinase catalytic domain // Protein kinase-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCACCTAAACGCTACGGCATGCACAGGCCCTGACAGTTCCTTGCAGTCCC
Internal bar code:TGAGGTCATTTGATATCCCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2887
LEAP-Seq percent confirming:97.2973
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:TCTTTGCATGGACGGCTGAT
Suggested primer 2:GCAGCTCTATCACCGACTCC