Insertion junction: CLIP2.001804_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.001804
Chromosome:chromosome 16
Location:4371263
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g668650 (1 of 1) PTHR34204//PTHR34204:SF2 - FAMILY NOT NAMED // RNA-BINDING ASCH DOMAIN PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGTTATGTGCATTACCACTGCCGAGCTGTGATGTGTGCGGAGCGGCGC
Internal bar code:GTGCCTCGCTAGGCATTATACA

Confirmation - LEAP-Seq

LEAP-Seq distance:277
LEAP-Seq percent confirming:81.8182
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:AGGATGTTGCATCAGGGGTG
Suggested primer 2:CCTTTTTCCCATCCTCCCCC