Insertion junction: CLIP2.001806_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.001806
Chromosome:chromosome 9
Location:2296719
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g394550 RPPK2 ribose-phosphate pyrophosphokinase; (1 of 1) PTHR10210//PTHR10210:SF45 - RIBOSE-PHOSPHATE PYROPHOSPHOKINASE // RIBOSE-PHOSPHATE PYROPHOSPHOKINASE 3, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGAACGTTGAGGCTGCGGTGTCGGCGCAACATTCAAATGCAGGGCTCAG
Internal bar code:CAAAACGCATATCCAGAAACAA

Confirmation - LEAP-Seq

LEAP-Seq distance:4667
LEAP-Seq percent confirming:94.2857
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CTCAAAACCTTGCACCAGCC
Suggested primer 2:GCATGAGGATCGATGCCTGA