Insertion junction: CLIP2.001806_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.001806
Chromosome:chromosome 9
Location:2296720
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g394550 RPPK2 ribose-phosphate pyrophosphokinase; (1 of 1) PTHR10210//PTHR10210:SF45 - RIBOSE-PHOSPHATE PYROPHOSPHOKINASE // RIBOSE-PHOSPHATE PYROPHOSPHOKINASE 3, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGCTGCCATCGGCAGGGCGGGTTGCTGACGCTGCCTCCCCCTCCGCCC
Internal bar code:CAAAACGCATATCCAGAAACAA

Confirmation - LEAP-Seq

LEAP-Seq distance:598
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GCATGAGGATCGATGCCTGA
Suggested primer 2:CTCAAAACCTTGCACCAGCC