Insertion junction: CLIP2.001816_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.001816
Chromosome:chromosome 17
Location:5003421
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g735800 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAACAGGAGGACGGCTGTGTGACCCCCCTTCAACTCCTACCTCCTCTCT
Internal bar code:GTGAAGCGTCAGTCTCCGGCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:91
LEAP-Seq percent confirming:23.0769
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GTCCCCAGGTGGATGACAAG
Suggested primer 2:GGTGCTTTACTGCAAAGGGC