Insertion junction: CLIP2.001817_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.001817
Chromosome:chromosome 12
Location:3210659
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g499950 CPL18 (1 of 2) PF07819 - PGAP1-like protein (PGAP1); possible serine esterase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCAGCTCTCAATTGCCTCACTGCTTTGGTCCTTCATGCATTGGTCGGT
Internal bar code:CATTCGTATGACAGTAAGAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2197
LEAP-Seq percent confirming:54.5455
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:AGTCTTCTTCAGCCTGGTGC
Suggested primer 2:GCTGACAACCAAACGGACAC