Insertion junction: CLIP2.001823_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.001823
Chromosome:chromosome 10
Location:654947
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g422000 TMG6,TRM1 (1 of 1) PTHR10631:SF3 - TRNA (GUANINE(26)-N(2))-DIMETHYLTRANSFERASE; tRNA (guanine-N2)-methyltransferase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTACAATGAGGCCCAGGTGGGGGAGCGCATTCAGCGTGCTGGATTGCG
Internal bar code:GGAAAGCGGTACGACTGTTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1261
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CATACCGGATGGACCTCAGC
Suggested primer 2:CGGTGATATGTGGCAAAGCG