Insertion junction: CLIP2.001828_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.001828
Chromosome:chromosome 16
Location:2420878
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g659850 CGL37 conserved protein related to shikimate kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCCACCCGGTCGCTGCGCGGGCTGCCACGCACTGCAGCGCCCCCGCAC
Internal bar code:AATCGCAGGAATACACGAGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:753
LEAP-Seq percent confirming:86.2069
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTTCACACGTGAGCAGGA
Suggested primer 2:CCTCTGACACCCACCAATCC