Insertion junction: CLIP2.001828_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.001828
Chromosome:chromosome 16
Location:2420884
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g659850 CGL37 conserved protein related to shikimate kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCACGGGGCAAGTCGCGCACATGGCGCGTACATGCCCGTAGCCCTGGCCC
Internal bar code:AATCGCAGGAATACACGAGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:695
LEAP-Seq percent confirming:76.9231
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCTGACACCCACCAATCC
Suggested primer 2:GAGTTCACACGTGAGCAGGA