Insertion junction: CLIP2.001829_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.001829
Chromosome:chromosome 10
Location:2342357
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g434600 TRP21,FAP148 (1 of 1) PTHR22847//PTHR22847:SF493 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED; Cation Channel Domain Flagellar Associated Protein 148 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGCCATGATCCTGGTCTGGTTCAAGTCGTTGTTCTACGGGCTCGCCTT
Internal bar code:AACGTTTTAAAAAAAAGGAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1480
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:AGCATGTTGAGCAGCAGGAT
Suggested primer 2:CGCTCGCTCATCTACGTCTT