Insertion junction: CLIP2.001833_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.001833
Chromosome:chromosome 1
Location:5551301
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g039550 PLAP1,PLP1 Plastid lipid associated protein 1; (1 of 230) IPR017986 - WD40-repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTTGGGTGCGTGCGGCCTAGCTGATGGCTCCGATGATGACAACATGGTG
Internal bar code:GCTGGTACCGGAGTGGACGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:3025
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTCTTGCTGTATGGCAGG
Suggested primer 2:TCCTAAATTTCGTCCGCCCC