Insertion junction: CLIP2.001835_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.001835
Chromosome:chromosome 5
Location:3535076
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g233650 FXL9 (1 of 2) IPR000014//IPR011990 - PAS domain // Tetratricopeptide-like helical domain; FixL-like PAS domain protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGTGAGCAGCGCAGCGCTTACACTTTTGCTCATCTACCAAGGTCTGGC
Internal bar code:ATACTAGGAACGCTGATGGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1977
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:80
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:80

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGCTTGGGTATGCCAAGA
Suggested primer 2:ACCATTTCCTCGCTGGTCAG