Insertion junction: CLIP2.001835_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.001835
Chromosome:chromosome 5
Location:3535077
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g233650 FXL9 (1 of 2) IPR000014//IPR011990 - PAS domain // Tetratricopeptide-like helical domain; FixL-like PAS domain protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACATGTTGCGCTCGCAGGGCGGCGAGCCTCACATCTTGGATAGTGTGCG
Internal bar code:TGCTTAACACCTTGGATGGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:4650
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:ACCATTTCCTCGCTGGTCAG
Suggested primer 2:CCTGCTTGGGTATGCCAAGA