Insertion junction: CLIP2.001837_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.001837
Chromosome:chromosome 14
Location:847000
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g613050 (1 of 80) IPR003882 - Pistil-specific extensin-like protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTTACATTCCAGGCCCAGGTCTAAGGATGTAAGCTGGTCCCGCCGACC
Internal bar code:CGGTACATTAAGCGCTATCTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2453
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTGGCAATCTGTCTGGGG
Suggested primer 2:CGGGGTCATACATTCGAGGG