Insertion junction: CLIP2.001840_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.001840
Chromosome:chromosome 2
Location:288769
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g074900 (1 of 1) PTHR10774//PTHR10774:SF82 - EXTENDED SYNAPTOTAGMIN-RELATED // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACTGCGCCCTTTGCCGCACCCGCCGCCGCCGCGGCCGCCTCCTGCGCT
Internal bar code:AGAAGCTCGGGGTAATAAGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1463
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTTGTTGTGACGGCCTTC
Suggested primer 2:CTCCTCCATGCTGGCTGTAG