Insertion junction: CLIP2.001849_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.001849
Chromosome:chromosome 10
Location:2149454
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g433350 (1 of 19) PTHR31251:SF1 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 10-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACTCGCTCGTGGCTATCGCAACTAACCCATAACATGTTGTAATAAGAGA
Internal bar code:GCATACAGATCGTGATGAATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1761
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:AGACGCCAGTGTACAACAGG
Suggested primer 2:GTCGCTACTGCTGCTCCTAG