Insertion junction: CLIP2.001850_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.001850
Chromosome:chromosome 1
Location:116015
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g000800 CGL136 Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGAGGTGATGGCGCTCGAGTGGCGTGGTCGCAGCGGCTCGTCTGGGCT
Internal bar code:TGCGAATAGAGGCGGGGTAGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2591
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGTTTAGTGGTCTGCGGT
Suggested primer 2:TTCGCGTAGTAGTGCAGCAA