Insertion junction: CLIP2.001851_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.001851
Chromosome:chromosome 6
Location:2859218
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g272300 CPLD57 (1 of 1) PTHR23029:SF45 - PHOSPHOGLYCERATE MUTASE FAMILY PROTEIN; Phosphoglycerate mutase family protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGGAGGCTTGAAATCCCAATGTCAGCCACAGTACTCGGATTCGTCAAG
Internal bar code:TAGATCGTTAGCGCTCACGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2790
LEAP-Seq percent confirming:96.8326
LEAP-Seq n confirming:214
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:221

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTGGTCACCCATCTCTTT
Suggested primer 2:TAGGGAAGGCCAGGGTAGTC