Insertion junction: CLIP2.001852_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.001852
Chromosome:chromosome 1
Location:3836770
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g025100 PGP9 (1 of 1) PTHR18901//PTHR18901:SF22 - 2-DEOXYGLUCOSE-6-PHOSPHATE PHOSPHATASE 2 // SUBFAMILY NOT NAMED; Putative phosphoglycolate phosphatase 3'UTR
Cre01.g025150 CPLD15 conserved organelle protein with lipase active site; (1 of 1) PTHR11440:SF48 - HYDROLASE-LIKE PROTEIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGCAAGAGGTCAGGGACGCGTCCGGACGTACTGGCTGGTACGTGTGGT
Internal bar code:GGCGTGAGTACCGATGGCGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:6470
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:AGCGTGGATGTGTGGGAAAT
Suggested primer 2:GATGCAGGTGTGGTGTGGTA