Insertion junction: CLIP2.001854_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.001854
Chromosome:chromosome 7
Location:2242581
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g327450 DNJ34 DnaJ-like protein; (1 of 1) PTHR24078//PTHR24078:SF201 - DNAJ HOMOLOG SUBFAMILY C MEMBER // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATTCATAACTTTGCAATTACTACCCTGATTGAAACTCTGAAAGTGAAC
Internal bar code:ATATCTTTGAAGCGGAACGACC

Confirmation - LEAP-Seq

LEAP-Seq distance:952
LEAP-Seq percent confirming:21.0526
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:30
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:GCACAAGTAGCGAATGAGCG
Suggested primer 2:CGACCGACCCTGAACTTTGA