Insertion junction: CLIP2.001860_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.001860
Chromosome:chromosome 14
Location:1126873
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g614850 FAP33,ANK17 Flagellar Associated Protein 33; (1 of 78) IPR002110//IPR020683 - Ankyrin repeat // Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGTTCCGCGGCTTGGCGCCGCTGTCTCAACAGTGGATGAGCGCCCCCC
Internal bar code:TATACGGGTATTCTCGGATTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:91
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CCACAGATCGCCCATTTCCT
Suggested primer 2:CTTGTTCACCACGCCTGTTG