Insertion junction: CLIP2.001862_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.001862
Chromosome:chromosome 12
Location:3144253
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g500650 RNB2 (1 of 1) PTHR23355//PTHR23355:SF39 - RIBONUCLEASE // SUBFAMILY NOT NAMED; chloroplast RNase II CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCAGCGCGAGGAGATGGGGCTGGTGGCGTTCCTGCTTGAGGACCAGGG
Internal bar code:GCCCAAGAGGGATCGCCCGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:56
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CACTTTGACCACAACCTGCG
Suggested primer 2:ATCCCTTTGCGACTGCTCAA