Insertion junction: CLIP2.001863_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.001863
Chromosome:chromosome 16
Location:7554057
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g683483 REX1-B,REX1B (1 of 1) PF14966 - DNA repair REX1-B (DNA_repr_REX1B); DNA repair protein and protein of unknown function 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGACTTACCCTCCGTGCCACAGACTACCACGCTACCTGGTTCGGCCAGGC
Internal bar code:TCCGGCGCCCTCAATCATATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1162
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCGTGCGCATATCGTTTT
Suggested primer 2:GAATGGAGCTGGAGGACGAG