Insertion junction: CLIP2.001864_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.001864
Chromosome:chromosome 13
Location:1907186
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g575850 (1 of 10) PF13460 - NAD(P)H-binding (NAD_binding_10) 3'UTR
Cre13.g575900 CGL117 (1 of 1) PF04959//PF12066 - Arsenite-resistance protein 2 (ARS2) // Domain of unknown function (DUF3546) (DUF3546); predicted protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATTCATGTCCGCGCAACGTGTAGCCGTGCTGTCAAGCTCTATCCGTCCC
Internal bar code:TTTCGTGATTCGAATACCCATC

Confirmation - LEAP-Seq

LEAP-Seq distance:3376
LEAP-Seq percent confirming:97.7778
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:CGGAATGCGCGAGTACTTTG
Suggested primer 2:GAGGCGTGAGTACCATACGG