Insertion junction: CLIP2.001867_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.001867
Chromosome:chromosome 9
Location:1362002
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g400312 (1 of 5) IPR001680//IPR011047//IPR017986 - WD40 repeat // Quinonprotein alcohol dehydrogenase-like superfamily // WD40-repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCCTCCTGCCAAGCTGTCGCGGCGGGAGCGCAAGCGCCCCCATTGCCT
Internal bar code:AAGCATCTTTTTTCAAACATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2585
LEAP-Seq percent confirming:82.3529
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:GGCCTCCTCTTCGTTCAACA
Suggested primer 2:CAGCCCTGTCTCGAACTTGT