Insertion junction: CLIP2.001868_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.001868
Chromosome:chromosome 12
Location:5216669
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g527250 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCAAACCCCTTCGGTCTCACCTGCTCCGTGCCTGTCCGTGCTGGCGGCT
Internal bar code:CAATCCTCGGTTGTATGGATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1842
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTGTGAAAGGGAGCGACA
Suggested primer 2:GCCCAAAGAAATGCAACCGT