Insertion junction: CLIP2.001873_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.001873
Chromosome:chromosome 12
Location:8722663
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g547500 5'UTR
Cre12.g547651 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAAAAGTCCTATGGCCCATCGCCTTGCCCTGCATTTTGCAGCGACTCCG
Internal bar code:CAAAGGATGAGATAGTGGATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:5706
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTGCAAGCTTCGCCTCTA
Suggested primer 2:GTTTGGGTTGGCAAGCTCAG