Insertion junction: CLIP2.001893_4

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.001893
Chromosome:chromosome 13
Location:3821727
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g589200 (1 of 21) IPR011016 - Zinc finger, RING-CH-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATACCACCGACCCTGTTGCCACAGAAAGCAGCAACCAGCAGCAAACATCG
Internal bar code:TAGTTTGTAGCCCCCCAATAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2618
LEAP-Seq percent confirming:92.5926
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GTTATGGGGCTGATGGGCTT
Suggested primer 2:ATTCGACGGCCTTGACTTGT