Insertion junction: CLIP2.001910_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.001910
Chromosome:chromosome 14
Location:938471
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g613450 CGL87 (1 of 1) PTHR12818:SF0 - NEF-ASSOCIATED PROTEIN 1; Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTCTAAACGTAAATCGCAATCATAAAACGCAGCTTGCGTTAATTCCCT
Internal bar code:ATTTACCACGGCATATTGATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:593
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGCATAGCGTTTCATGGC
Suggested primer 2:CTACCACCACCACCATCACC