Insertion junction: CLIP2.001913_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.001913
Chromosome:chromosome 17
Location:3402460
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g723250 CPP1,CPE1 chloroplast processing enzyme; (1 of 1) PTHR11851//PTHR11851:SF152 - METALLOPROTEASE // PROTEIN UCR-2.3 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTAATACAAAAAGCTGTACCGGTGTGCGAGCGCAGTGATACACGTCCTG
Internal bar code:CTCAACCCGGTGTGCCGCTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2950
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGACGAGGACGCCATTTT
Suggested primer 2:CAACCCCTCTCACATGCCAT