Insertion junction: CLIP2.001915_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.001915
Chromosome:chromosome 6
Location:2658037
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g270400 GT90-6,GT90F6 GT90 family protein 6; (1 of 52) PF05686 - Glycosyl transferase family 90 (Glyco_transf_90) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCCGGTACCGCGCCAGGGGCAGCGCCCGCGGAAAGTCGCTCAGCTTCG
Internal bar code:ATGGGCTCTAGGGGGATAGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2907
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:ACTCCTCCTCGCTTCCATCT
Suggested primer 2:CCAAGGAGTTGTGCTCGTCT