Insertion junction: CLIP2.001916_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.001916
Chromosome:chromosome 3
Location:6447534
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g193300 CPLD56 (1 of 1) PTHR18901//PTHR18901:SF4 - 2-DEOXYGLUCOSE-6-PHOSPHATE PHOSPHATASE 2 // SUBFAMILY NOT NAMED; haloacid dehalogenase-like hydrolase family protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAAGATTGAAGGCAAATGTAAGCGCATAGTGCAAGACATGATCAAGCAC
Internal bar code:CACTAGAGAGGAGATGCTCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3654
LEAP-Seq percent confirming:99.1667
LEAP-Seq n confirming:119
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:120

Suggested primers for confirmation by PCR

Suggested primer 1:TCAGGTTGCTGACGAGTTCC
Suggested primer 2:CCACGCTGTCCAAACCAAAG