Insertion junction: CLIP2.001921_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.001921
Chromosome:chromosome 12
Location:5582749
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g531050 RAA3,OPR67 psaA mRNA trans-splicing factor; (1 of 45) IPR013584 - RAP domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGTTCGTGCCTGGAAATGCTGCAGATCGTGGCGGTGCTGCACGCCTTC
Internal bar code:TCAAGCGACTTGCTCCGCCACT

Confirmation - LEAP-Seq

LEAP-Seq distance:3184
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:GCACACGTCAGGAAAAGCTG
Suggested primer 2:TACCGCAAAGCCCGTTACTT