Insertion junction: CLIP2.001924_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.001924
Chromosome:chromosome 2
Location:4375097
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g105450 CGL141 (1 of 1) PTHR36749:SF1 - F7O18.3 PROTEIN; Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCACTAGCTCACCATGGCGCCATGCCCCCAGCTCTGCCTAGTCACTGAC
Internal bar code:TAGGTACAGAGTTTGTGCGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1476
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:ACGAGTCGTCTGTGTGCATT
Suggested primer 2:GCGCAGAGTTGACGCTAATG