Insertion junction: CLIP2.001924_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.001924
Chromosome:chromosome 2
Location:4375099
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g105450 CGL141 (1 of 1) PTHR36749:SF1 - F7O18.3 PROTEIN; Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGGTGAACCGCCGAGCAAGGGTGGCACGCGCGCACGACCCGCACGCCC
Internal bar code:AACATTTATTTAGTGCGACTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4646
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:83
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:83

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCAGAGTTGACGCTAATG
Suggested primer 2:ACGAGTCGTCTGTGTGCATT