Insertion junction: CLIP2.001926_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.001926
Chromosome:chromosome 5
Location:3582889
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g234100 CYP745A1,CYP17 Cytochrome P450, CYP197 superfamily; (1 of 1) PTHR24305:SF59 - CYTOCHROME P450 313A1-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTTTCGGATGATGGAAGGCTTGGGAGGGGCGACGTGACAGCGGGCATG
Internal bar code:GACTTTTGATCATATGCAGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:604
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:AACATTTGCTTGGTCCGTGC
Suggested primer 2:CCAACACCTCCCACATCTCC