Insertion junction: CLIP2.001927_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.001927
Chromosome:chromosome 12
Location:481447
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g494550 RNP10 RNA binding protein; (1 of 3) K14947 - epithelial splicing regulatory protein 1/2 (ESRP1_2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGGATCGCGCCCATCCTGAGAAGCTTCCGAAGCTCGCACCTGAATCAA
Internal bar code:GTAGTGACTGCTTAGCGTAACT

Confirmation - LEAP-Seq

LEAP-Seq distance:2401
LEAP-Seq percent confirming:95.082
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:GACCCTCGATTCGGACATCC
Suggested primer 2:ACATGCAAGATGACTCCGCA