Insertion junction: CLIP2.001945_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.001945
Chromosome:chromosome 4
Location:1419351
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g214250 AGO2 Argonaute-like protein; (1 of 3) PTHR22891:SF0 - PROTEIN ARGONAUTE-2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGATGTGATC
Internal bar code:TGCGGACTCACCGGTACGATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:338
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CGACCCAAGCGCAATGTATG
Suggested primer 2:TGTAGAACTCCAGCAGCAGC