Insertion junction: CLIP2.001949_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.001949
Chromosome:chromosome 12
Location:3626153
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g513300 CGL23 Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGATCGACACGGACTTTGGCAGGTTTTGTGAGCTCGTGGCGCTTACCCA
Internal bar code:GAATTTTGCTGTAGTGCATTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:688
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGTACATAGTCCTGGCGC
Suggested primer 2:ACCGCCTGACCTAATTTGCA