Insertion junction: CLIP2.001956_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.001956
Chromosome:chromosome 16
Location:2029196
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g656900 (1 of 77) IPR001623 - DnaJ domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAAATATAGTTTGCAATGGGCTAATGCGCACGAGTGCTGAAGCAGTTTT
Internal bar code:TTTGACCTTGGACGGGTTGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1470
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCGGTACAAACTCGTGGT
Suggested primer 2:GCAGGTGTGTGCTAAGGGAT