Insertion junction: CLIP2.001961_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.001961
Chromosome:chromosome 8
Location:3720145
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g380452 (1 of 12) 2.7.11.22//2.7.11.23 - Cyclin-dependent kinase / Cdk-activating protein kinase // [RNA-polymerase]-subunit kinase / CTD kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTCGAGCCAAAAGACGCCCACAAGAGCCCGCCTAGCGAGCCCACAGTC
Internal bar code:CGGCTCTTTCTTGTCCGATTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:4224
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:GCAAAGGCAACATGTTCGGT
Suggested primer 2:CCGACCGGCATAACCTACTC