Insertion junction: CLIP2.001961_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.001961
Chromosome:chromosome 8
Location:3720145
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g380452 (1 of 12) 2.7.11.22//2.7.11.23 - Cyclin-dependent kinase / Cdk-activating protein kinase // [RNA-polymerase]-subunit kinase / CTD kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCATGGCGGCCGGCCCGCGGCCTCCGCGGCTGGCCGGGCGGGTTCTTCC
Internal bar code:GGGTCGTGATTCAGTAGTCCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2553
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CCGACCGGCATAACCTACTC
Suggested primer 2:GCAAAGGCAACATGTTCGGT